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LPCAT2 lysophosphatidylcholine acyltransferase 2 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120384617, updated on 21-Mar-2024

Summary

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Gene symbol
LPCAT2
Gene description
lysophosphatidylcholine acyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See LPCAT2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 16 NC_052638.1 (13607272..13656150, complement)

Linkage Group 16 - NC_052638.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120384507 Neighboring gene uncharacterized LOC120384508 Neighboring gene solute carrier family 6 member 2 Neighboring gene uncharacterized LOC120384509 Neighboring gene calpain small subunit 2 Neighboring gene matrix metallopeptidase 2 Neighboring gene iroquois homeobox 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052638.1 Chromosome 16 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052638.1 Reference ASM1616193v1 Primary Assembly

    Range
    13607272..13656150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039503582.1 → XP_039359516.1  lysophosphatidylcholine acyltransferase 2 isoform X1

    Conserved Domains (3) summary
    cd07991
    Location:125 → 336
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:383 → 505
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd00051
    Location:442 → 500
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_039503584.1 → XP_039359518.1  lysophosphatidylcholine acyltransferase 2 isoform X2

    Conserved Domains (3) summary
    cd07991
    Location:1 → 210
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:257 → 379
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd00051
    Location:316 → 374
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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