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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120375486, updated on 21-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 12 NC_052634.1 (15328512..15590621)

Linkage Group 12 - NC_052634.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120375489 Neighboring gene uncharacterized LOC120375493 Neighboring gene uncharacterized LOC120375494 Neighboring gene uncharacterized LOC120375490 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene uncharacterized LOC120375492 Neighboring gene sphingosine 1-phosphate receptor 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052634.1 Chromosome 12 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052634.1 Reference ASM1616193v1 Primary Assembly

    Range
    15328512..15590621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039496138.1 → XP_039352072.1  kin of IRRE-like protein 3 isoform X1

    Conserved Domains (3) summary
    cd00096
    Location:4 → 6
    Ig; Ig strand C' [structural motif]
    cd05898
    Location:235 → 332
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:2 → 63
    Ig; Immunoglobulin domain

  2. XM_039496141.1 → XP_039352075.1  kin of IRRE-like protein 3 isoform X2

    Conserved Domains (3) summary
    cd00096
    Location:4 → 6
    Ig; Ig strand C' [structural motif]
    cd05898
    Location:235 → 332
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:2 → 63
    Ig; Immunoglobulin domain

  3. XM_039496139.1 → XP_039352073.1  kin of IRRE-like protein 3 isoform X1

    Conserved Domains (3) summary
    cd00096
    Location:4 → 6
    Ig; Ig strand C' [structural motif]
    cd05898
    Location:235 → 332
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:2 → 63
    Ig; Immunoglobulin domain

  4. XM_039496142.1 → XP_039352076.1  kin of IRRE-like protein 3 isoform X3

    Conserved Domains (3) summary
    cd00096
    Location:137 → 141
    Ig; Ig strand A' [structural motif]
    cd05898
    Location:212 → 309
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:129 → 210
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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