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SPAM1 sperm adhesion molecule 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120374315, updated on 21-Mar-2024

Summary

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Gene symbol
SPAM1
Gene description
sperm adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (319295374..319304063)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120374326 Neighboring gene uncharacterized LOC120374319 Neighboring gene ADP-ribosylation factor-like protein 8B Neighboring gene uncharacterized LOC120395995

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    319295374..319304063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039493744.1 → XP_039349678.1  hyaluronidase PH-20

    Conserved Domains (1) summary
    pfam01630
    Location:53 → 384
    Glyco_hydro_56; Hyaluronidase
Nucleotide Protein
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Gene LinkOut

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