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TAB3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120372302, updated on 21-Mar-2024

Summary

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Gene symbol
TAB3
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See TAB3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (150085292..150158636, complement)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120403384 Neighboring gene protein lava lamp-like Neighboring gene glycerol kinase Neighboring gene dystrophin Neighboring gene uncharacterized LOC120371058 Neighboring gene uncharacterized LOC120371061

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    150085292..150158636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039489315.1 → XP_039345249.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:645 → 667
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:249 → 334
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:222 → 430
    dnaA; chromosomal replication initiator protein DnaA
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:645 → 664
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_039489338.1 → XP_039345272.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X4

    Conserved Domains (5) summary
    smart00547
    Location:590 → 612
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:249 → 334
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:222 → 419
    dnaA; chromosomal replication initiator protein DnaA
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:590 → 609
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_039489320.1 → XP_039345254.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X2

    Conserved Domains (5) summary
    smart00547
    Location:636 → 658
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:249 → 334
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:222 → 430
    dnaA; chromosomal replication initiator protein DnaA
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:636 → 655
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_039489329.1 → XP_039345263.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X3

    Conserved Domains (4) summary
    smart00547
    Location:622 → 644
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:226 → 311
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:199 → 407
    dnaA; chromosomal replication initiator protein DnaA
    sd00029
    Location:622 → 641
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  5. XM_039489298.1 → XP_039345232.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:645 → 667
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:249 → 334
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:222 → 430
    dnaA; chromosomal replication initiator protein DnaA
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:645 → 664
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  6. XM_039489305.1 → XP_039345239.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:645 → 667
    ZnF_RBZ; Zinc finger domain
    PRK10263
    Location:249 → 334
    PRK10263; DNA translocase FtsK; Provisional
    PRK14086
    Location:222 → 430
    dnaA; chromosomal replication initiator protein DnaA
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:645 → 664
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

RNA

  1. XR_005584861.1 RNA Sequence

  2. XR_005584862.1 RNA Sequence

  3. XR_005584866.1 RNA Sequence

Nucleotide Protein
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