U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120372162, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See A4GALT in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (238617099..238707908)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene uncharacterized LOC120406997 Neighboring gene ARF GTPase activating protein 3 Neighboring gene poly(U)-specific endoribonuclease-like Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene RAB15 effector protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    238617099..238707908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039489028.1 → XP_039344962.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  2. XM_039489039.1 → XP_039344973.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  3. XM_039489000.1 → XP_039344934.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  4. XM_039488991.1 → XP_039344925.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  5. XM_039489010.1 → XP_039344944.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  6. XM_039489043.1 → XP_039344977.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  7. XM_039489020.1 → XP_039344954.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

RNA

  1. XR_005584757.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.