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ACSL4 acyl-CoA synthetase long chain family member 4 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120371967, updated on 21-Mar-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 9 NC_052631.1 (86199913..86256150)

Linkage Group 9 - NC_052631.1Genomic Context describing neighboring genes Neighboring gene AMMECR nuclear protein 1 Neighboring gene transmembrane protein 164 Neighboring gene nuclear transport factor 2 like export factor 2 Neighboring gene uncharacterized LOC120371975 Neighboring gene insulin receptor substrate 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052631.1 Chromosome 9 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052631.1 Reference ASM1616193v1 Primary Assembly

    Range
    86199913..86256150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039488507.1 → XP_039344441.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    Conserved Domains (2) summary
    PRK07868
    Location:51 → 167
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:121 → 695
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  2. XM_039488509.1 → XP_039344443.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    Conserved Domains (2) summary
    PRK07868
    Location:51 → 167
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:121 → 694
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  3. XM_039488510.1 → XP_039344444.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

    Conserved Domains (2) summary
    PRK07868
    Location:7 → 126
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:80 → 654
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  4. XM_039488511.1 → XP_039344445.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

    Conserved Domains (2) summary
    PRK07868
    Location:7 → 126
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:80 → 654
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  5. XM_039488508.1 → XP_039344442.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    Conserved Domains (2) summary
    PRK07868
    Location:51 → 167
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:121 → 695
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins
Nucleotide Protein
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