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GNPDA1 glucosamine-6-phosphate deaminase 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120370976, updated on 21-Mar-2024

Summary

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Gene symbol
GNPDA1
Gene description
glucosamine-6-phosphate deaminase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See GNPDA1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 8 NC_052630.1 (15391835..15401597, complement)

Linkage Group 8 - NC_052630.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 4 Neighboring gene ring finger protein 14 Neighboring gene uncharacterized LOC120370977 Neighboring gene Nedd4 family interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052630.1 Chromosome 8 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052630.1 Reference ASM1616193v1 Primary Assembly

    Range
    15391835..15401597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039486375.1 → XP_039342309.1  glucosamine-6-phosphate isomerase 1 isoform X4

    Conserved Domains (1) summary
    PRK00443
    Location:30 → 226
    nagB; glucosamine-6-phosphate deaminase; Provisional

  2. XM_039486371.1 → XP_039342305.1  glucosamine-6-phosphate isomerase 1 isoform X1

    Conserved Domains (1) summary
    PRK00443
    Location:30 → 287
    nagB; glucosamine-6-phosphate deaminase; Provisional

  3. XM_039486374.1 → XP_039342308.1  glucosamine-6-phosphate isomerase 1 isoform X3

    Conserved Domains (1) summary
    cl00339
    Location:1 → 253
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  4. XM_039486372.1 → XP_039342306.1  glucosamine-6-phosphate isomerase 1 isoform X2

    Conserved Domains (1) summary
    cl00339
    Location:4 → 256
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
Nucleotide Protein
Heading Accession and Version

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