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SGCD sarcoglycan delta [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120370066, updated on 21-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: 8
Exon count:
21
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 8 NC_052630.1 (3496191..4008063, complement)

Linkage Group 8 - NC_052630.1Genomic Context describing neighboring genes Neighboring gene hepatitis A virus cellular receptor 1 homolog Neighboring gene T-cell immunoglobulin and mucin domain-containing protein 4-like Neighboring gene uncharacterized LOC120370068 Neighboring gene uncharacterized LOC120370200 Neighboring gene uncharacterized LOC120370320 Neighboring gene mitochondrial ribosomal protein L22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052630.1 Chromosome 8 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052630.1 Reference ASM1616193v1 Primary Assembly

    Range
    3496191..4008063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039484141.1 → XP_039340075.1  delta-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 265
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_039484136.1 → XP_039340070.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_039484137.1 → XP_039340071.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_039484134.1 → XP_039340068.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_039484133.1 → XP_039340067.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  6. XM_039484135.1 → XP_039340069.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  7. XM_039484132.1 → XP_039340066.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  8. XM_039484131.1 → XP_039340065.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  9. XM_039484142.1 → XP_039340076.1  delta-sarcoglycan isoform X4

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 242
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  10. XM_039484139.1 → XP_039340073.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 299
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  11. XM_039484144.1 → XP_039340078.1  delta-sarcoglycan isoform X6

    Conserved Domains (1) summary
    pfam04790
    Location:1 → 235
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  12. XM_039484140.1 → XP_039340074.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 276
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  13. XM_039484143.1 → XP_039340077.1  delta-sarcoglycan isoform X5

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 190
    Sarcoglycan_1; Sarcoglycan complex subunit protein

RNA

  1. XR_005583592.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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