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PSAP prosaposin [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120369467, updated on 21-Mar-2024

Summary

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Gene symbol
PSAP
Gene description
prosaposin
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See PSAP in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 7 NC_052629.1 (41749414..41794808, complement)

Linkage Group 7 - NC_052629.1Genomic Context describing neighboring genes Neighboring gene cadherin related 23 Neighboring gene chromosome 7 C10orf105 homolog Neighboring gene V-set immunoregulatory receptor Neighboring gene prosaposin-like Neighboring gene carbohydrate sulfotransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052629.1 Chromosome 7 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prosaposin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052629.1 Reference ASM1616193v1 Primary Assembly

    Range
    41749414..41794808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039482800.1 → XP_039338734.1  prosaposin isoform X2

    Conserved Domains (2) summary
    smart00741
    Location:411 → 485
    SapB; Saposin (B) Domains
    pfam02199
    Location:496 → 526
    SapA; Saposin A-type domain

  2. XM_039482799.1 → XP_039338733.1  prosaposin isoform X1

    Conserved Domains (2) summary
    smart00741
    Location:412 → 486
    SapB; Saposin (B) Domains
    pfam02199
    Location:497 → 527
    SapA; Saposin A-type domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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