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SUMF1 sulfatase modifying factor 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120369261, updated on 21-Mar-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 7 NC_052629.1 (111336996..111418178)

Linkage Group 7 - NC_052629.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e40 Neighboring gene uncharacterized LOC120409031 Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene uncharacterized LOC120369262 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene uncharacterized LOC120368636

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052629.1 Chromosome 7 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052629.1 Reference ASM1616193v1 Primary Assembly

    Range
    111336996..111418178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039482342.1 → XP_039338276.1  formylglycine-generating enzyme isoform X1

    Conserved Domains (1) summary
    pfam03781
    Location:86 → 363
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  2. XM_039482343.1 → XP_039338277.1  formylglycine-generating enzyme isoform X2

    Conserved Domains (1) summary
    pfam03781
    Location:86 → 338
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  3. XM_039482344.1 → XP_039338278.1  formylglycine-generating enzyme isoform X3

    Conserved Domains (1) summary
    pfam03781
    Location:86 → 315
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1
Nucleotide Protein
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Gene LinkOut

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