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CHST3 carbohydrate sulfotransferase 3 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120368541, updated on 21-Mar-2024

Summary

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Gene symbol
CHST3
Gene description
carbohydrate sulfotransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See CHST3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 7 NC_052629.1 (41879614..41925763)

Linkage Group 7 - NC_052629.1Genomic Context describing neighboring genes Neighboring gene prosaposin Neighboring gene prosaposin-like Neighboring gene uncharacterized LOC120368543 Neighboring gene AIF family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052629.1 Chromosome 7 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052629.1 Reference ASM1616193v1 Primary Assembly

    Range
    41879614..41925763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039480659.1 → XP_039336593.1  carbohydrate sulfotransferase 3

    Conserved Domains (1) summary
    cl21551
    Location:244 → 429
    Sulfotransfer_3; Sulfotransferase family

  2. XM_039480660.1 → XP_039336594.1  carbohydrate sulfotransferase 3

    Conserved Domains (1) summary
    cl21551
    Location:244 → 429
    Sulfotransfer_3; Sulfotransferase family

  3. XM_039480661.1 → XP_039336595.1  carbohydrate sulfotransferase 3

    Conserved Domains (1) summary
    cl21551
    Location:244 → 429
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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