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LOC120335440 mitochondrial basic amino acids transporter-like [ Styela clava ]

Gene ID: 120335440, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120335440
Gene description
mitochondrial basic amino acids transporter-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Styela clava
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Stolidobranchia; Styelidae; Styela
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Genomic context

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See LOC120335440 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1312258v2 (GCF_013122585.1) Unplaced Scaffold NW_024102834.1 (7955127..7965403)

NW_024102834.1Genomic Context describing neighboring genes Neighboring gene muscarinic acetylcholine receptor M2-like Neighboring gene adenylosuccinate synthetase-like Neighboring gene transcriptional repressor protein YY1-like Neighboring gene 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024102834 Unplaced Scaffold Reference ASM1312258v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Styela clava Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1312258v2 Primary Assembly

Genomic

  1. NW_024102834.1 Reference ASM1312258v2 Primary Assembly

    Range
    7955127..7965403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039402941.1 → XP_039258875.1  mitochondrial basic amino acids transporter-like

    Conserved Domains (1) summary
    pfam00153
    Location:91 → 183
    Mito_carr; Mitochondrial carrier protein

  2. XM_039402942.1 → XP_039258876.1  mitochondrial basic amino acids transporter-like

    Conserved Domains (1) summary
    pfam00153
    Location:91 → 183
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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