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LOC120327525 mediator of RNA polymerase II transcription subunit 23-like [ Styela clava ]

Gene ID: 120327525, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120327525
Gene description
mediator of RNA polymerase II transcription subunit 23-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Styela clava
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Stolidobranchia; Styelidae; Styela
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Genomic context

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See LOC120327525 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1312258v2 (GCF_013122585.1) Unplaced Scaffold NW_024102828.1 (3997323..4003648, complement)

NW_024102828.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting-associated protein 13D-like Neighboring gene uncharacterized LOC120327521 Neighboring gene mediator of RNA polymerase II transcription subunit 23-like Neighboring gene patatin-like phospholipase domain-containing protein 7 Neighboring gene jerky protein homolog-like Neighboring gene platelet-activating factor acetylhydrolase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024102828 Unplaced Scaffold Reference ASM1312258v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Styela clava Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1312258v2 Primary Assembly

Genomic

  1. NW_024102828.1 Reference ASM1312258v2 Primary Assembly

    Range
    3997323..4003648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039393838.1 → XP_039249772.1  mediator of RNA polymerase II transcription subunit 23-like

    Conserved Domains (1) summary
    pfam11573
    Location:22 → 1316
    Med23; Mediator complex subunit 23
Nucleotide Protein
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