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CCNT2 cyclin T2 [ Crotalus tigris (Tiger rattlesnake) ]

Gene ID: 120307512, updated on 21-Mar-2024

Summary

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Gene symbol
CCNT2
Gene description
cyclin T2
Gene type
protein coding
RefSeq status
MODEL
Organism
Crotalus tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
Orthologs
human mouse all
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Genomic context

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See CCNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024096637.1 (615116..642953, complement)

NW_024096637.1Genomic Context describing neighboring genes Neighboring gene RAB3 GTPase activating protein catalytic subunit 1 Neighboring gene mitogen-activated protein kinase kinase kinase 19 Neighboring gene uncharacterized LOC120307498

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024096637 Unplaced Scaffold Reference ASM1654583v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription, elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-T2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654583v1

Genomic

  1. NW_024096637.1 Reference ASM1654583v1

    Range
    615116..642953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039342368.1 → XP_039198302.1  cyclin-T2 isoform X2

    Conserved Domains (2) summary
    cd20596
    Location:48 → 184
    CYCLIN_CCNT2_rpt1; first cyclin box found in cyclin-T2 (CCNT2)
    cd20598
    Location:188 → 301
    CYCLIN_CCNT2_rpt2; second cyclin box found in cyclin-T2 (CCNT2)

  2. XM_039342367.1 → XP_039198301.1  cyclin-T2 isoform X1

    Conserved Domains (2) summary
    cd20596
    Location:48 → 184
    CYCLIN_CCNT2_rpt1; first cyclin box found in cyclin-T2 (CCNT2)
    cd20598
    Location:188 → 301
    CYCLIN_CCNT2_rpt2; second cyclin box found in cyclin-T2 (CCNT2)

RNA

  1. XR_005556572.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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