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CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 [ Crotalus tigris (Tiger rattlesnake) ]

Gene ID: 120305484, updated on 21-Mar-2024

Summary

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Gene symbol
CAPZA1
Gene description
capping actin protein of muscle Z-line subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Crotalus tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
Orthologs
human mouse all
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Genomic context

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See CAPZA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024096560.1 (137824..161000, complement)

NW_024096560.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member C Neighboring gene Mov10 RNA helicase Neighboring gene suppression of tumorigenicity 7 like Neighboring gene Wnt family member 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024096560 Unplaced Scaffold Reference ASM1654583v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of F-actin capping protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-capping protein subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654583v1

Genomic

  1. NW_024096560.1 Reference ASM1654583v1

    Range
    137824..161000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039337391.1 → XP_039193325.1  F-actin-capping protein subunit alpha-1 isoform X2

    Conserved Domains (1) summary
    pfam01267
    Location:17 → 283
    F-actin_cap_A; F-actin capping protein alpha subunit

  2. XM_039337390.1 → XP_039193324.1  F-actin-capping protein subunit alpha-1 isoform X1

    Conserved Domains (1) summary
    pfam01267
    Location:40 → 306
    F-actin_cap_A; F-actin capping protein alpha subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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