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ITGA8 integrin subunit alpha 8 [ Crotalus tigris (Tiger rattlesnake) ]

Gene ID: 120302747, updated on 21-Mar-2024

Summary

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Gene symbol
ITGA8
Gene description
integrin subunit alpha 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Crotalus tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024100606.1 (11637568..11777220)

NW_024100606.1Genomic Context describing neighboring genes Neighboring gene phosphotriesterase related Neighboring gene MINDY lysine 48 deubiquitinase 3 Neighboring gene family with sequence similarity 171 member A1 Neighboring gene protein FAM171A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100606 Unplaced Scaffold Reference ASM1654583v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654583v1

Genomic

  1. NW_024100606.1 Reference ASM1654583v1

    Range
    11637568..11777220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039331621.1 → XP_039187555.1  integrin alpha-8 isoform X2

    Conserved Domains (3) summary
    smart00191
    Location:382 → 437
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:483 → 932
    Integrin_alpha2; Integrin alpha
    pfam13517
    Location:276 → 340
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  2. XM_039331620.1 → XP_039187554.1  integrin alpha-8 isoform X1

    Conserved Domains (3) summary
    smart00191
    Location:382 → 437
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:483 → 932
    Integrin_alpha2; Integrin alpha
    pfam13517
    Location:276 → 340
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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