U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZFYVE27 zinc finger FYVE-type containing 27 [ Crotalus tigris (Tiger rattlesnake) ]

Gene ID: 120302568, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
ZFYVE27
Gene description
zinc finger FYVE-type containing 27
Gene type
protein coding
RefSeq status
MODEL
Organism
Crotalus tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ZFYVE27 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024100602.1 (492011..512651, complement)

NW_024100602.1Genomic Context describing neighboring genes Neighboring gene LON peptidase N-terminal domain and ring finger 1 Neighboring gene cartilage acidic protein 1-like Neighboring gene golgin A7 family member B Neighboring gene uncharacterized LOC120302570 Neighboring gene MARVEL domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024100602 Unplaced Scaffold Reference ASM1654583v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum tubular network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotrophin TRK receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum tubular network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in growth cone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protrudin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654583v1

Genomic

  1. NW_024100602.1 Reference ASM1654583v1

    Range
    492011..512651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039331163.1 → XP_039187097.1  protrudin isoform X3

    Conserved Domains (1) summary
    cd15723
    Location:352 → 412
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  2. XM_039331161.1 → XP_039187095.1  protrudin isoform X1

    Conserved Domains (1) summary
    cd15723
    Location:388 → 448
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  3. XM_039331162.1 → XP_039187096.1  protrudin isoform X2

    Conserved Domains (1) summary
    cd15723
    Location:381 → 441
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  4. XM_039331165.1 → XP_039187099.1  protrudin isoform X3

    Conserved Domains (1) summary
    cd15723
    Location:352 → 412
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  5. XM_039331166.1 → XP_039187100.1  protrudin isoform X3

    Conserved Domains (1) summary
    cd15723
    Location:352 → 412
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  6. XM_039331164.1 → XP_039187098.1  protrudin isoform X3

    Conserved Domains (1) summary
    cd15723
    Location:352 → 412
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.