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LOC120290870 triacylglycerol lipase SDP1 [ Eucalyptus grandis ]

Gene ID: 120290870, updated on 18-Sep-2024

Summary

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Gene symbol
LOC120290870
Gene description
triacylglycerol lipase SDP1
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC120290870 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 1 NC_052612.1 (43956337..43960002, complement)

Chromosome 1 - NC_052612.1Genomic Context describing neighboring genes Neighboring gene basic form of pathogenesis-related protein 1 Neighboring gene probable calcium-binding protein CML36 Neighboring gene protein GAST1 Neighboring gene N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052612.1 Chromosome 1 Reference ASM1654582v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triacylglycerol lipase SDP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052612.1 Reference ASM1654582v1 Primary Assembly

    Range
    43956337..43960002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039307463.1 → XP_039163397.1  triacylglycerol lipase SDP1

    UniProtKB/TrEMBL
    A0A059DI04
    Conserved Domains (2) summary
    cd07231
    Location:162 → 570
    Pat_SDP1-like; Sugar-Dependent 1 like lipase
    pfam11815
    Location:96 → 225
    DUF3336; Domain of unknown function (DUF3336)
Nucleotide Protein
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