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LOC120246339 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3-like [ Hyaena hyaena (striped hyena) ]

Gene ID: 120246339, updated on 16-Nov-2023

Summary

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Gene symbol
LOC120246339
Gene description
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
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Genomic context

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See LOC120246339 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024081099.1 (11409..143891)

NW_024081099.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit O, mitochondrial Neighboring gene small nucleolar RNA SNORA32 Neighboring gene uncharacterized LOC120246346 Neighboring gene small nucleolar RNA SNORA24 Neighboring gene serine protease 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024081099 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024081099.1 Reference ASM300989v1 Primary Assembly

    Range
    11409..143891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039253807.1 → XP_039109738.1  LOW QUALITY PROTEIN: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3-like

    Conserved Domains (2) summary
    pfam00685
    Location:272 → 523
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:5 → 183
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

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