U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SYNJ2 synaptojanin 2 [ Hyaena hyaena (striped hyena) ]

Gene ID: 120245163, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SYNJ2
Gene description
synaptojanin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SYNJ2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024081039.1 (505738..609369)

NW_024081039.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1C chain-like Neighboring gene sorting nexin 9 Neighboring gene uncharacterized LOC120245158 Neighboring gene serine active site containing 1 Neighboring gene general transcription factor IIH subunit 5 Neighboring gene U6 spliceosomal RNA Neighboring gene TUB like protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024081039 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
synaptojanin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024081039.1 Reference ASM300989v1 Primary Assembly

    Range
    505738..609369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039252082.1 → XP_039108013.1  synaptojanin-2 isoform X1

    Conserved Domains (3) summary
    COG5329
    Location:28 → 485
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:872 → 1008
    DUF1866; Domain of unknown function (DUF1866)
    cl00490
    Location:530 → 861
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

  2. XM_039252083.1 → XP_039108014.1  synaptojanin-2 isoform X2

    Conserved Domains (3) summary
    COG5329
    Location:28 → 485
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
    pfam08952
    Location:872 → 1008
    DUF1866; Domain of unknown function (DUF1866)
    cl00490
    Location:530 → 861
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.