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GAPT GRB2 binding adaptor protein, transmembrane [ Hyaena hyaena (striped hyena) ]

Gene ID: 120239503, updated on 21-Mar-2024

Summary

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Gene symbol
GAPT
Gene description
GRB2 binding adaptor protein, transmembrane
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
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Genomic context

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See GAPT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024080864.1 (247788..253634)

NW_024080864.1Genomic Context describing neighboring genes Neighboring gene polo like kinase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene RAB3C, member RAS oncogene family Neighboring gene phosphodiesterase 4D Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024080864 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein GAPT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024080864.1 Reference ASM300989v1 Primary Assembly

    Range
    247788..253634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039243823.1 → XP_039099754.1  protein GAPT isoform X1

    Conserved Domains (3) summary
    sd00031
    Location:66 → 89
    LRR_1; leucine-rich repeat [structural motif]
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)
    pfam13855
    Location:61 → 89
    LRR_8; Leucine rich repeat

  2. XM_039243826.1 → XP_039099757.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:2 → 155
    GAPT; GRB2-binding adapter (GAPT)

  3. XM_039243824.1 → XP_039099755.1  protein GAPT isoform X1

    Conserved Domains (3) summary
    sd00031
    Location:66 → 89
    LRR_1; leucine-rich repeat [structural motif]
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)
    pfam13855
    Location:61 → 89
    LRR_8; Leucine rich repeat

  4. XM_039243825.1 → XP_039099756.1  protein GAPT isoform X2

    Conserved Domains (1) summary
    pfam11770
    Location:2 → 155
    GAPT; GRB2-binding adapter (GAPT)
Nucleotide Protein
Heading Accession and Version

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