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TNFAIP3 TNF alpha induced protein 3 [ Hyaena hyaena (striped hyena) ]

Gene ID: 120239375, updated on 21-Mar-2024

Summary

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Gene symbol
TNFAIP3
Gene description
TNF alpha induced protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
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Genomic context

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See TNFAIP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024080861.1 (1051438..1066455)

NW_024080861.1Genomic Context describing neighboring genes Neighboring gene protein BEX5-like Neighboring gene uncharacterized LOC120239367 Neighboring gene uncharacterized LOC120239377 Neighboring gene p53 apoptosis effector related to PMP22

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024080861 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K29-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K33-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor alpha-induced protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024080861.1 Reference ASM300989v1 Primary Assembly

    Range
    1051438..1066455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039243583.1 → XP_039099514.1  tumor necrosis factor alpha-induced protein 3

    Conserved Domains (2) summary
    smart00259
    Location:475 → 500
    ZnF_A20; A20-like zinc fingers
    pfam02338
    Location:98 → 257
    OTU; OTU-like cysteine protease
Nucleotide Protein
Heading Accession and Version

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