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TNFRSF11A TNF receptor superfamily member 11a [ Hyaena hyaena (striped hyena) ]

Gene ID: 120230802, updated on 21-Mar-2024

Summary

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Gene symbol
TNFRSF11A
Gene description
TNF receptor superfamily member 11a
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
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Genomic context

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See TNFRSF11A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024080679.1 (135953..194096, complement)

NW_024080679.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC domain-containing protein 2-like Neighboring gene uncharacterized LOC120230775 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene tubulin alpha-1C chain-like Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024080679 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lymph node development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mammary gland alveolus development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multinuclear osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to interleukin-1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 11A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024080679.1 Reference ASM300989v1 Primary Assembly

    Range
    135953..194096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039230549.1 → XP_039086480.1  tumor necrosis factor receptor superfamily member 11A isoform X3

    Conserved Domains (3) summary
    PRK14086
    Location:326 → 477
    dnaA; chromosomal replication initiator protein DnaA
    cd00185
    Location:113 → 153
    TNFRSF; CRD4 [structural motif]
    cl22855
    Location:104 → 154
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

  2. XM_039230547.1 → XP_039086478.1  tumor necrosis factor receptor superfamily member 11A isoform X2

    Conserved Domains (2) summary
    PRK14086
    Location:342 → 493
    dnaA; chromosomal replication initiator protein DnaA
    cd13411
    Location:8 → 170
    TNFRSF11A; Tumor necrosis factor receptor superfamily member 11A (TNFRSF11A), also known as receptor activator of nuclear factor-kappaB (RANK)

  3. XM_039230546.1 → XP_039086477.1  tumor necrosis factor receptor superfamily member 11A isoform X1

    Conserved Domains (2) summary
    PRK14086
    Location:351 → 502
    dnaA; chromosomal replication initiator protein DnaA
    cd13411
    Location:17 → 179
    TNFRSF11A; Tumor necrosis factor receptor superfamily member 11A (TNFRSF11A), also known as receptor activator of nuclear factor-kappaB (RANK)

  4. XM_039230545.1 → XP_039086476.1  tumor necrosis factor receptor superfamily member 11A isoform X1

    Conserved Domains (2) summary
    PRK14086
    Location:351 → 502
    dnaA; chromosomal replication initiator protein DnaA
    cd13411
    Location:17 → 179
    TNFRSF11A; Tumor necrosis factor receptor superfamily member 11A (TNFRSF11A), also known as receptor activator of nuclear factor-kappaB (RANK)

  5. XM_039230548.1 → XP_039086479.1  tumor necrosis factor receptor superfamily member 11A isoform X3

    Conserved Domains (3) summary
    PRK14086
    Location:326 → 477
    dnaA; chromosomal replication initiator protein DnaA
    cd00185
    Location:113 → 153
    TNFRSF; CRD4 [structural motif]
    cl22855
    Location:104 → 154
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

  6. XM_039230550.1 → XP_039086481.1  tumor necrosis factor receptor superfamily member 11A isoform X4

    Conserved Domains (1) summary
    cd13411
    Location:17 → 179
    TNFRSF11A; Tumor necrosis factor receptor superfamily member 11A (TNFRSF11A), also known as receptor activator of nuclear factor-kappaB (RANK)
Nucleotide Protein
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