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PKD2 polycystin 2, transient receptor potential cation channel [ Hyaena hyaena (striped hyena) ]

Gene ID: 120221182, updated on 21-Mar-2024

Summary

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Gene symbol
PKD2
Gene description
polycystin 2, transient receptor potential cation channel
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
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Genomic context

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See PKD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024081395.1 (20901..81140)

NW_024081395.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily G member 2 (JR blood group) Neighboring gene cytochrome c Neighboring gene copper transport protein ATOX1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024081395 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables muscle alpha-actinin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in release of sequestered calcium ion into cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024081395.1 Reference ASM300989v1 Primary Assembly

    Range
    20901..81140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039218437.1 → XP_039074368.1  polycystin-2

    Conserved Domains (4) summary
    cd15902
    Location:754 → 782
    EFh_HEF; EF-hand motif [structural motif]
    cl23634
    Location:724 → 792
    EFh_HEF; EF-hand, calcium binding motif, found in the hexa-EF hand proteins family
    pfam08016
    Location:269 → 687
    PKD_channel; Polycystin cation channel
    pfam18109
    Location:834 → 868
    Fer4_24; Ferredoxin I 4Fe-4S cluster domain
Nucleotide Protein
Heading Accession and Version

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