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LOC120091001 sulfoquinovosyl transferase SQD2 [ Benincasa hispida (wax gourd) ]

Gene ID: 120091001, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120091001
Gene description
sulfoquinovosyl transferase SQD2
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120091001 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 11 NC_052359.1 (53401424..53407160)

Chromosome 11 - NC_052359.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome non-ATPase regulatory subunit 7 homolog A Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Neighboring gene josephin-like protein Neighboring gene uncharacterized acetyltransferase At3g50280-like Neighboring gene transcription factor DIVARICATA-like Neighboring gene transcription factor DIVARICATA-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052359.1 Chromosome 11 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052359.1 Reference ASM972705v1

    Range
    53401424..53407160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039048766.1 → XP_038904694.1  sulfoquinovosyl transferase SQD2

    Conserved Domains (1) summary
    PLN02871
    Location:42 → 513
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
Heading Accession and Version

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