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LOC120085816 putative callose synthase 8 [ Benincasa hispida (wax gourd) ]

Gene ID: 120085816, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120085816
Gene description
putative callose synthase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120085816 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
41
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 9 NC_052357.1 (89858068..89875679, complement)

Chromosome 9 - NC_052357.1Genomic Context describing neighboring genes Neighboring gene persulfide dioxygenase ETHE1 homolog, mitochondrial Neighboring gene C2 domain-containing protein At1g53590 Neighboring gene pentatricopeptide repeat-containing protein At3g14580, mitochondrial Neighboring gene RCC1 domain-containing protein RUG3, mitochondrial Neighboring gene proteasome subunit alpha type-4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052357.1 Chromosome 9 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative callose synthase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052357.1 Reference ASM972705v1

    Range
    89858068..89875679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039042022.1 → XP_038897950.1  putative callose synthase 8 isoform X2

    Conserved Domains (3) summary
    pfam02364
    Location:1078 → 1804
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:60 → 171
    Vta1; Vta1 like
    pfam14288
    Location:340 → 441
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_039042021.1 → XP_038897949.1  putative callose synthase 8 isoform X1

    Conserved Domains (3) summary
    pfam02364
    Location:1093 → 1819
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:60 → 171
    Vta1; Vta1 like
    pfam14288
    Location:340 → 441
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  3. XM_039042023.1 → XP_038897951.1  putative callose synthase 8 isoform X3

    Conserved Domains (2) summary
    pfam02364
    Location:798 → 1524
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:45 → 146
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  4. XM_039042024.1 → XP_038897952.1  putative callose synthase 8 isoform X4

    Conserved Domains (2) summary
    pfam02364
    Location:713 → 1439
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:2 → 61
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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