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LOC120081333 uncharacterized LOC120081333 [ Benincasa hispida (wax gourd) ]

Gene ID: 120081333, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120081333
Gene description
uncharacterized LOC120081333
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120081333 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 7 NC_052355.1 (49055059..49058125)

Chromosome 7 - NC_052355.1Genomic Context describing neighboring genes Neighboring gene probable carbohydrate esterase At4g34215 Neighboring gene probable carbohydrate esterase At4g34215 Neighboring gene probable E3 ubiquitin-protein ligase XERICO Neighboring gene uncharacterized LOC120080853

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052355.1 Chromosome 7 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC120081333

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052355.1 Reference ASM972705v1

    Range
    49055059..49058125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039036088.1 → XP_038892016.1  uncharacterized protein LOC120081333

    Conserved Domains (1) summary
    pfam04724
    Location:43 → 390
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
Heading Accession and Version

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