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LOC120077575 mitochondrial carnitine/acylcarnitine carrier-like protein [ Benincasa hispida (wax gourd) ]

Gene ID: 120077575, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120077575
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120077575 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 5 NC_052353.1 (13619907..13623087)

Chromosome 5 - NC_052353.1Genomic Context describing neighboring genes Neighboring gene AT-hook motif nuclear-localized protein 13-like Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene mitochondrial carnitine/acylcarnitine carrier-like protein Neighboring gene pentatricopeptide repeat-containing protein At4g17616

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052353.1 Chromosome 5 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052353.1 Reference ASM972705v1

    Range
    13619907..13623087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039031513.1 → XP_038887441.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein

  2. XM_039031514.1 → XP_038887442.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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