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LOC120076406 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 [ Benincasa hispida (wax gourd) ]

Gene ID: 120076406, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120076406
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120076406 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 4 NC_052352.1 (8362402..8366732)

Chromosome 4 - NC_052352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120076053 Neighboring gene uncharacterized LOC120076054 Neighboring gene protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like Neighboring gene thioredoxin-like 4, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052352.1 Chromosome 4 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052352.1 Reference ASM972705v1

    Range
    8362402..8366732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039030221.1 → XP_038886149.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X1

    Conserved Domains (1) summary
    cd02537
    Location:293 → 537
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_039030222.1 → XP_038886150.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X2

    Conserved Domains (1) summary
    cd02537
    Location:228 → 472
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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