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LOC120071660 UDP-N-acetylglucosamine transferase subunit ALG13 homolog [ Benincasa hispida (wax gourd) ]

Gene ID: 120071660, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120071660
Gene description
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120071660 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 2 NC_052350.1 (54529018..54537532, complement)

Chromosome 2 - NC_052350.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene probable serine/threonine-protein kinase PBL7 Neighboring gene ribosome biogenesis protein BRX1 homolog 1-like Neighboring gene peroxisome biogenesis protein 7-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052350.1 Chromosome 2 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052350.1 Reference ASM972705v1

    Range
    54529018..54537532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039024029.1 → XP_038879957.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog

    Conserved Domains (1) summary
    pfam04101
    Location:16 → 164
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain

  2. XM_039024030.1 → XP_038879958.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog

    Conserved Domains (1) summary
    pfam04101
    Location:16 → 164
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain

  3. XM_039024031.1 → XP_038879959.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog

    Conserved Domains (1) summary
    pfam04101
    Location:16 → 164
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain
Nucleotide Protein
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