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LOC120064148 cobalamin trafficking protein CblD-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120064148, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120064148
Gene description
cobalamin trafficking protein CblD-like
See related
EnsemblRapid:ENSSNMG00000028869
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120064148 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 19 NC_052325.1 (12464602..12473401, complement)

Chromosome 19 - NC_052325.1Genomic Context describing neighboring genes Neighboring gene ly6/PLAUR domain-containing protein 6B-like Neighboring gene ly6/PLAUR domain-containing protein 6-like Neighboring gene rho-related GTP-binding protein RhoE-like Neighboring gene anosmin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052325.1 Chromosome 19 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052325.1 Reference SaNama_1.0 Primary Assembly

    Range
    12464602..12473401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039014520.1 → XP_038870448.1  cobalamin trafficking protein CblD-like isoform X1

    UniProtKB/TrEMBL
    A0A8U1F6M5
    Conserved Domains (1) summary
    pfam10229
    Location:48 → 316
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_039014521.1 → XP_038870449.1  cobalamin trafficking protein CblD-like isoform X2

    UniProtKB/TrEMBL
    A0A8U1H3Y9
    Related
    ENSSNMP00000040651.1, ENSSNMT00000045248.1
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 295
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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