U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC120062557 C-terminal-binding protein 2 [ Salvelinus namaycush (lake trout) ]

Gene ID: 120062557, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC120062557
Gene description
C-terminal-binding protein 2
See related
EnsemblRapid:ENSSNMG00000004879
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC120062557 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 17 NC_052323.1 (33636978..33652643, complement)

Chromosome 17 - NC_052323.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B-like Neighboring gene spondin-2-like Neighboring gene protein FAM53C-like Neighboring gene uncharacterized LOC120062093

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052323.1 Chromosome 17 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
C-terminal-binding protein 1; C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052323.1 Reference SaNama_1.0 Primary Assembly

    Range
    33636978..33652643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039012616.1 → XP_038868544.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U1H1D2
    Related
    ENSSNMP00000007004.1, ENSSNMT00000007646.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_039012617.1 → XP_038868545.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8U1H421
    Related
    ENSSNMP00000006992.1, ENSSNMT00000007634.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_039012618.1 → XP_038868546.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8U1H3S1
    Related
    ENSSNMP00000006989.1, ENSSNMT00000007630.1
    Conserved Domains (1) summary
    cd05299
    Location:5 → 323
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_039012619.1 → XP_038868547.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8U1H4H2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases