U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC120052625 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120052625, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC120052625
Gene description
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like
See related
EnsemblRapid:ENSSNMG00000003975
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC120052625 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 8 NC_052314.1 (33106424..33197096)

Chromosome 8 - NC_052314.1Genomic Context describing neighboring genes Neighboring gene receptor-type tyrosine-protein phosphatase F Neighboring gene lysine-specific demethylase 4A-like Neighboring gene uncharacterized LOC120051886 Neighboring gene leucine rich repeat containing 41

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052314.1 Chromosome 8 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052314.1 Reference SaNama_1.0 Primary Assembly

    Range
    33106424..33197096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038999647.1 → XP_038855575.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A8U0UJU1
    Related
    ENSSNMP00000005603.1, ENSSNMT00000006162.1
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_038999651.1 → XP_038855579.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A8U0UJ38
    Related
    ENSSNMP00000005598.1, ENSSNMT00000006155.1
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 330
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_038999650.1 → XP_038855578.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A8U0R652
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 334
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_038999649.1 → XP_038855577.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A8U0UJU1
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases