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LOC120044076 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120044076, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120044076
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120044076 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 3 NC_052309.1 (82464943..82488650, complement)

Chromosome 3 - NC_052309.1Genomic Context describing neighboring genes Neighboring gene cytosolic Fe-S cluster assembly factor narfl-like Neighboring gene hydroxyacylglutathione hydrolase, mitochondrial Neighboring gene acylpyruvase FAHD1, mitochondrial-like Neighboring gene uncharacterized LOC120041152 Neighboring gene methionine-R-sulfoxide reductase B1-A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052309.1 Chromosome 3 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052309.1 Reference SaNama_1.0 Primary Assembly

    Range
    82464943..82488650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038988664.1 → XP_038844592.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A8U0QJI2
    Conserved Domains (1) summary
    pfam00685
    Location:96 → 332
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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