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LOC120039292 methyltransferase-like protein 23 [ Salvelinus namaycush (lake trout) ]

Gene ID: 120039292, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120039292
Gene description
methyltransferase-like protein 23
See related
EnsemblRapid:ENSSNMG00000047828
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120039292 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 3 NC_052309.1 (77203705..77205898, complement)

Chromosome 3 - NC_052309.1Genomic Context describing neighboring genes Neighboring gene glutamine-rich protein 2 Neighboring gene serine/arginine-rich splicing factor 2-like Neighboring gene bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-like Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene E3 ubiquitin-protein ligase RNF12-B-like Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2-like Neighboring gene caskin-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052309.1 Chromosome 3 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052309.1 Reference SaNama_1.0 Primary Assembly

    Range
    77203705..77205898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038984758.1 → XP_038840686.1  methyltransferase-like protein 23 isoform X2

    UniProtKB/TrEMBL
    A0A8U0QA83
    Related
    ENSSNMP00000070414.1, ENSSNMT00000076422.1
    Conserved Domains (1) summary
    cl17173
    Location:3 → 106
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_038984741.1 → XP_038840669.1  methyltransferase-like protein 23 isoform X1

    UniProtKB/TrEMBL
    A0A8U0U505
    Conserved Domains (1) summary
    cl17173
    Location:3 → 111
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_038984749.1 → XP_038840677.1  methyltransferase-like protein 23 isoform X1

    UniProtKB/TrEMBL
    A0A8U0U505
    Conserved Domains (1) summary
    cl17173
    Location:3 → 111
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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