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alg2 ALG2 alpha-1,3/1,6-mannosyltransferase [ Salvelinus namaycush (lake trout) ]

Gene ID: 120030766, updated on 18-Sep-2024

Summary

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Gene symbol
alg2
Gene description
ALG2 alpha-1,3/1,6-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See alg2 in Genome Data Viewer
Location:
chromosome: 37
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 37 NC_052343.1 (31721164..31724206)

Chromosome 37 - NC_052343.1Genomic Context describing neighboring genes Neighboring gene extensin-like Neighboring gene SEC61 translocon subunit beta Neighboring gene DOMON domain-containing protein FRRS1L-like Neighboring gene transmembrane protein 245-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052343.1 Chromosome 37 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052343.1 Reference SaNama_1.0 Primary Assembly

    Range
    31721164..31724206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038976187.1 → XP_038832115.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A8U0TYM5
    Conserved Domains (1) summary
    cd03805
    Location:2 → 398
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins

  2. XM_038976188.1 → XP_038832116.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A8U0TYM5
    Conserved Domains (1) summary
    cd03805
    Location:2 → 398
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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