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st8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [ Salvelinus namaycush (lake trout) ]

Gene ID: 120026439, updated on 21-Mar-2024

Summary

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Gene symbol
st8sia3
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
See related
EnsemblRapid:ENSSNMG00000017702
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See st8sia3 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
4
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 31 NC_052337.1 (1005804..1027337, complement)

Chromosome 31 - NC_052337.1Genomic Context describing neighboring genes Neighboring gene ferrochelatase Neighboring gene one cut domain family member 2-like Neighboring gene transcription factor AP-1-like Neighboring gene protein Hook homolog 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052337.1 Chromosome 31 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052337.1 Reference SaNama_1.0 Primary Assembly

    Range
    1005804..1027337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038971302.1 → XP_038827230.1  sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

    UniProtKB/TrEMBL
    A0A8U0PM14
    Related
    ENSSNMP00000023168.1, ENSSNMT00000026830.1
    Conserved Domains (1) summary
    pfam00777
    Location:108 → 371
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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