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LOC120024605 mitochondrial basic amino acids transporter-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120024605, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120024605
Gene description
mitochondrial basic amino acids transporter-like
See related
EnsemblRapid:ENSSNMG00000010316
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120024605 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 29 NC_052335.1 (7279729..7293286)

Chromosome 29 - NC_052335.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit Neighboring gene thyroxine 5-deiodinase-like Neighboring gene uncharacterized LOC120023940 Neighboring gene ankyrin repeat and EF-hand domain containing 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052335.1 Chromosome 29 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052335.1 Reference SaNama_1.0 Primary Assembly

    Range
    7279729..7293286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038968898.1 → XP_038824826.1  mitochondrial basic amino acids transporter-like isoform X1

    UniProtKB/TrEMBL
    A0A8U0PHY3
    Related
    ENSSNMP00000013691.1, ENSSNMT00000015606.1
    Conserved Domains (1) summary
    pfam00153
    Location:86 → 177
    Mito_carr; Mitochondrial carrier protein

  2. XM_038968899.1 → XP_038824827.1  mitochondrial basic amino acids transporter-like isoform X2

    UniProtKB/TrEMBL
    A0A8U0PID4
    Conserved Domains (1) summary
    pfam00153
    Location:34 → 125
    Mito_carr; Mitochondrial carrier protein

  3. XM_038968900.1 → XP_038824828.1  mitochondrial basic amino acids transporter-like isoform X2

    UniProtKB/TrEMBL
    A0A8U0PID4
    Conserved Domains (1) summary
    pfam00153
    Location:34 → 125
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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