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LOC120024108 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120024108, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120024108
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like
See related
EnsemblRapid:ENSSNMG00000035118
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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Location:
chromosome: 29
Exon count:
7
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 29 NC_052335.1 (23381693..23460048, complement)

Chromosome 29 - NC_052335.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase-like 4 Neighboring gene uncharacterized LOC120024489 Neighboring gene endoribonuclease ZC3H12A-like Neighboring gene cyclin-dependent kinase 19-like Neighboring gene uncharacterized LOC120024612 Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052335.1 Chromosome 29 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052335.1 Reference SaNama_1.0 Primary Assembly

    Range
    23381693..23460048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038968250.1 → XP_038824178.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8U0TQE2
    Conserved Domains (3) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_038968251.1 → XP_038824179.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A8U0PI24
    Conserved Domains (3) summary
    smart00547
    Location:757 → 780
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:758 → 777
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_038968249.1 → XP_038824177.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8U0TQE2
    Related
    ENSSNMP00000050511.1, ENSSNMT00000055455.1
    Conserved Domains (3) summary
    smart00547
    Location:762 → 785
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:763 → 782
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_038968252.1 → XP_038824180.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A8U0TQ48
    Conserved Domains (1) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
Nucleotide Protein
Heading Accession and Version

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