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LOC120018095 tRNA (guanine(26)-N(2))-dimethyltransferase-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120018095, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120018095
Gene description
tRNA (guanine(26)-N(2))-dimethyltransferase-like
See related
EnsemblRapid:ENSSNMG00000039437
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120018095 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 2 NC_052308.1 (72649585..72663606)

Chromosome 2 - NC_052308.1Genomic Context describing neighboring genes Neighboring gene syntaxin-10-like Neighboring gene nucleus accumbens-associated protein 1-like Neighboring gene lysosomal alpha-mannosidase-like Neighboring gene amine sulfotransferase-like Neighboring gene MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052308.1 Chromosome 2 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(26)-N(2))-dimethyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052308.1 Reference SaNama_1.0 Primary Assembly

    Range
    72649585..72663606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038961084.1 → XP_038817012.1  tRNA (guanine(26)-N(2))-dimethyltransferase-like

    UniProtKB/TrEMBL
    A0A8U0P2Y9
    Related
    ENSSNMP00000057399.1, ENSSNMT00000062548.1
    Conserved Domains (2) summary
    smart00356
    Location:649 → 673
    ZnF_C3H1; zinc finger
    pfam02005
    Location:92 → 551
    TRM; N2,N2-dimethylguanosine tRNA methyltransferase
Nucleotide Protein
Heading Accession and Version

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