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LOC119999158 sulfoquinovosyl transferase SQD2-like [ Tripterygium wilfordii ]

Gene ID: 119999158, updated on 7-Dec-2023

Summary

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Gene symbol
LOC119999158
Gene description
sulfoquinovosyl transferase SQD2-like
Locus tag
HS088_TW05G00332
Gene type
protein coding
RefSeq status
MODEL
Organism
Tripterygium wilfordii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Celastrales; Celastraceae; Tripterygium
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Genomic context

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See LOC119999158 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1340144v1 (GCF_013401445.1) 5 NC_052236.1 (9585543..9590383, complement)

Chromosome 5 - NC_052236.1Genomic Context describing neighboring genes Neighboring gene BAHD acyltransferase DCR-like Neighboring gene BAHD acyltransferase DCR-like Neighboring gene josephin-like protein Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052236.1 Chromosome 5 Reference ASM1340144v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tripterygium wilfordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1340144v1

Genomic

  1. NC_052236.1 Reference ASM1340144v1

    Range
    9585543..9590383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038846674.1 → XP_038702602.1  sulfoquinovosyl transferase SQD2-like

    UniProtKB/TrEMBL
    A0A7J7DMQ5
    Conserved Domains (1) summary
    PLN02871
    Location:88 → 509
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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