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dap death-associated protein [ Scyliorhinus canicula (smaller spotted catshark) ]

Gene ID: 119965899, updated on 21-Mar-2024

Summary

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Gene symbol
dap
Gene description
death-associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Scyliorhinus canicula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
Orthologs
human zebrafish all
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Genomic context

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See dap in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
100 current sScyCan1.1 (GCF_902713615.1) 5 NC_052150.1 (32544778..32628878, complement)

Chromosome 5 - NC_052150.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 33B-like Neighboring gene rhophilin associated tail protein 1-like Neighboring gene catenin delta-2-like Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene uncharacterized LOC119965604

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052150.1 Chromosome 5 Reference sScyCan1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables death domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
death-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sScyCan1.1 Primary Assembly

Genomic

  1. NC_052150.1 Reference sScyCan1.1 Primary Assembly

    Range
    32544778..32628878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038796880.1 → XP_038652808.1  death-associated protein 1 isoform X3

    Conserved Domains (1) summary
    pfam15228
    Location:12 → 51
    DAP; Death-associated protein

  2. XM_038796878.1 → XP_038652806.1  death-associated protein 1 isoform X1

    Conserved Domains (1) summary
    pfam15228
    Location:12 → 107
    DAP; Death-associated protein

  3. XM_038796881.1 → XP_038652809.1  death-associated protein 1 isoform X4

    Conserved Domains (1) summary
    pfam15228
    Location:15 → 47
    DAP; Death-associated protein

  4. XM_038796879.1 → XP_038652807.1  death-associated protein 1 isoform X2

    Conserved Domains (1) summary
    pfam15228
    Location:15 → 103
    DAP; Death-associated protein
Nucleotide Protein
Heading Accession and Version

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