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kif20a kinesin family member 20A [ Scyliorhinus canicula (smaller spotted catshark) ]

Gene ID: 119965084, updated on 21-Mar-2024

Summary

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Gene symbol
kif20a
Gene description
kinesin family member 20A
Gene type
protein coding
RefSeq status
MODEL
Organism
Scyliorhinus canicula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
Orthologs
human zebrafish all
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Genomic context

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See kif20a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
100 current sScyCan1.1 (GCF_902713615.1) 4 NC_052149.1 (152138289..152197581, complement)

Chromosome 4 - NC_052149.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit DAPIT, mitochondrial-like Neighboring gene CDC23 (cell division cycle 23, yeast, homolog) Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene shootin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052149.1 Chromosome 4 Reference sScyCan1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables plus-end-directed microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIF20A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sScyCan1.1 Primary Assembly

Genomic

  1. NC_052149.1 Reference sScyCan1.1 Primary Assembly

    Range
    152138289..152197581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038795364.1 → XP_038651292.1  kinesin-like protein KIF20A isoform X2

    Conserved Domains (3) summary
    COG1196
    Location:564 → 835
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd21787
    Location:605 → 674
    RBD_KIF20A; RAB6 binding domain (RBD) found in kinesin-like protein KIF20A, and similar proteins
    cl22853
    Location:65 → 503
    Motor_domain; Myosin and Kinesin motor domain

  2. XM_038795365.1 → XP_038651293.1  kinesin-like protein KIF20A isoform X2

    Conserved Domains (3) summary
    COG1196
    Location:564 → 835
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd21787
    Location:605 → 674
    RBD_KIF20A; RAB6 binding domain (RBD) found in kinesin-like protein KIF20A, and similar proteins
    cl22853
    Location:65 → 503
    Motor_domain; Myosin and Kinesin motor domain

  3. XM_038795362.1 → XP_038651290.1  kinesin-like protein KIF20A isoform X1

    Conserved Domains (3) summary
    COG1196
    Location:573 → 844
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd21787
    Location:614 → 683
    RBD_KIF20A; RAB6 binding domain (RBD) found in kinesin-like protein KIF20A, and similar proteins
    cl22853
    Location:74 → 512
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein
Heading Accession and Version

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