U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPAP2 RNA polymerase II associated protein 2 [ Tachyglossus aculeatus (Australian echidna) ]

Gene ID: 119926758, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RPAP2
Gene description
RNA polymerase II associated protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachyglossus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Tachyglossidae; Tachyglossus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPAP2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
100 current mTacAcu1.pri (GCF_015852505.1) 4 NC_052069.1 (46398605..46572122)

Chromosome 4 - NC_052069.1Genomic Context describing neighboring genes Neighboring gene BTB domain containing 8 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene glomulin, FKBP associated protein Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene growth factor independent 1 transcriptional repressor Neighboring gene small nucleolar RNA SNORA7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052069.1 Chromosome 4 Reference mTacAcu1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase core enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative RNA polymerase II subunit B1 CTD phosphatase RPAP2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Tachyglossus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTacAcu1.pri

Genomic

  1. NC_052069.1 Reference mTacAcu1.pri

    Range
    46398605..46572122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038745114.1 → XP_038601042.1  putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1

    Conserved Domains (1) summary
    pfam04181
    Location:70 → 142
    RPAP2_Rtr1; Rtr1/RPAP2 family

  2. XM_038745115.1 → XP_038601043.1  putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X2

    Conserved Domains (1) summary
    pfam04181
    Location:70 → 142
    RPAP2_Rtr1; Rtr1/RPAP2 family

  3. XM_038745116.1 → XP_038601044.1  putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X3

    Conserved Domains (1) summary
    pfam04181
    Location:70 → 142
    RPAP2_Rtr1; Rtr1/RPAP2 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.