U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC119908884 solute carrier family 25 member 29 [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119908884, updated on 25-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC119908884
Gene description
solute carrier family 25 member 29
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Also known as
slc25a29
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC119908884 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040928.1 (11014941..11021562)

NW_024040928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119909340 Neighboring gene solute carrier family 25 member 47a Neighboring gene uncharacterized LOC119908885 Neighboring gene vertebrae development associated

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024040928 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus). Li C, et al. Mol Ecol Resour, 2015 Mar. PMID 25047482
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024040928.1 Reference ASM1485139v1 Primary Assembly

    Range
    11014941..11021562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038726803.1 → XP_038582731.1  mitochondrial basic amino acids transporter isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:87 → 182
    Mito_carr; Mitochondrial carrier protein

  2. XM_038726802.1 → XP_038582730.1  mitochondrial basic amino acids transporter isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:109 → 204
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.