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mmadhcb metabolism of cobalamin associated Db [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119903531, updated on 21-Mar-2024

Summary

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Gene symbol
mmadhcb
Gene description
metabolism of cobalamin associated Db
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Orthologs
human zebrafish all
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Genomic context

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See mmadhcb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040596.1 (34132917..34157528)

NW_024040596.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119903580 Neighboring gene N-myc (and STAT) interactor Neighboring gene diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) Neighboring gene complement C1q-like protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024040596 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Db

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024040596.1 Reference ASM1485139v1 Primary Assembly

    Range
    34132917..34157528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038719788.1 → XP_038575716.1  metabolism of cobalamin associated Db isoform X3

    Conserved Domains (1) summary
    pfam10229
    Location:24 → 295
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_038719785.1 → XP_038575713.1  metabolism of cobalamin associated Db isoform X1

    Conserved Domains (1) summary
    pfam10229
    Location:60 → 331
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_038719787.1 → XP_038575715.1  metabolism of cobalamin associated Db isoform X2

    Conserved Domains (1) summary
    pfam10229
    Location:58 → 329
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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