U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kirrel1b kirre like nephrin family adhesion molecule 1b [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119901750, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
kirrel1b
Gene description
kirre like nephrin family adhesion molecule 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kirrel1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040485.1 (7321330..7401821)

NW_024040485.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene cell adhesion molecule 3 Neighboring gene uncharacterized LOC119901752 Neighboring gene uncharacterized LOC119901751

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024040485 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 1b

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024040485.1 Reference ASM1485139v1 Primary Assembly

    Range
    7321330..7401821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038717398.1 → XP_038573326.1  kin of IRRE-like protein 1b isoform X1

    Conserved Domains (7) summary
    PHA02682
    Location:570 → 758
    PHA02682; ORF080 virion core protein; Provisional
    smart00409
    Location:25 → 114
    IG; Immunoglobulin
    smart00410
    Location:231 → 302
    IG_like; Immunoglobulin like
    pfam13927
    Location:306 → 371
    Ig_3; Immunoglobulin domain
    cd00096
    Location:121 → 124
    Ig; Ig strand A [structural motif]
    cd05898
    Location:389 → 492
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:120 → 217
    Ig; Immunoglobulin domain

  2. XM_038717400.1 → XP_038573328.1  kin of IRRE-like protein 1b isoform X2

    Conserved Domains (7) summary
    PHA02682
    Location:587 → 746
    PHA02682; ORF080 virion core protein; Provisional
    smart00409
    Location:25 → 114
    IG; Immunoglobulin
    smart00410
    Location:231 → 302
    IG_like; Immunoglobulin like
    pfam13927
    Location:306 → 371
    Ig_3; Immunoglobulin domain
    cd00096
    Location:121 → 124
    Ig; Ig strand A [structural motif]
    cd05898
    Location:389 → 492
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:120 → 217
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.