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coro2a coronin, actin binding protein, 2A [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119898892, updated on 21-Mar-2024

Summary

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Gene symbol
coro2a
Gene description
coronin, actin binding protein, 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Orthologs
human zebrafish all
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Genomic context

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See coro2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024040263.1 (8898982..8937680)

NW_024040263.1Genomic Context describing neighboring genes Neighboring gene GTPase activating protein (SH3 domain) binding protein 2 Neighboring gene USO1 vesicle transport factor Neighboring gene acidic (leucine-rich) nuclear phosphoprotein 32 family, member B Neighboring gene hemogen

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024040263 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coronin-2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024040263.1 Reference ASM1485139v1 Primary Assembly

    Range
    8898982..8937680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038713199.1 → XP_038569127.1  coronin-2A isoform X2

    Conserved Domains (2) summary
    sd00039
    Location:45 → 85
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:15 → 518
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_038713198.1 → XP_038569126.1  coronin-2A isoform X1

    Conserved Domains (2) summary
    sd00039
    Location:47 → 87
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:17 → 520
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_038713200.1 → XP_038569128.1  coronin-2A isoform X3

    Conserved Domains (2) summary
    sd00039
    Location:40 → 80
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:10 → 513
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_038713201.1 → XP_038569129.1  coronin-2A isoform X3

    Conserved Domains (2) summary
    sd00039
    Location:40 → 80
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:10 → 513
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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