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pigb phosphatidylinositol glycan anchor biosynthesis, class B [ Micropterus salmoides (largemouth bass) ]

Gene ID: 119889944, updated on 21-Mar-2024

Summary

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Gene symbol
pigb
Gene description
phosphatidylinositol glycan anchor biosynthesis, class B
Gene type
protein coding
RefSeq status
MODEL
Organism
Micropterus salmoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
Orthologs
human zebrafish all
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Genomic context

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See pigb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024044348.1 (21419709..21427953, complement)

NW_024044348.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase NEDD4-like Neighboring gene E3 ubiquitin-protein ligase NEDD4-like Neighboring gene protogenin homolog a (Gallus gallus) Neighboring gene cell cycle progression 1 Neighboring gene protein PIGBOS1 Neighboring gene RAB27A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024044348 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus). Li C, et al. Mol Ecol Resour, 2015 Mar. PMID 25047482

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485139v1 Primary Assembly

Genomic

  1. NW_024044348.1 Reference ASM1485139v1 Primary Assembly

    Range
    21419709..21427953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038700878.1 → XP_038556806.1  GPI mannosyltransferase 3

    Conserved Domains (1) summary
    cl21590
    Location:42 → 521
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_038700877.1 → XP_038556805.1  GPI mannosyltransferase 3

    Conserved Domains (1) summary
    cl21590
    Location:42 → 521
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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