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ABAT 4-aminobutyrate aminotransferase [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119862765, updated on 18-Sep-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
EnsemblRapid:ENSDCOG00030006033
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 10 NC_050077.1 (25983466..26127780, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 10 NC_050077.1 (25983482..26127780, complement)

Chromosome 10 - NC_050077.1Genomic Context describing neighboring genes Neighboring gene calcium regulated heat stable protein 1 Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 114

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050077.1 Reference rDerCor1.pri.v4

    Range
    25983466..26127780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038420038.2 → XP_038275966.1  4-aminobutyrate aminotransferase, mitochondrial

    Related
    ENSDCOP00030019724.1, ENSDCOT00030020833.1
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  2. XM_043494676.1 → XP_043350611.1  4-aminobutyrate aminotransferase, mitochondrial

    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  3. XM_038420040.2 → XP_038275968.1  4-aminobutyrate aminotransferase, mitochondrial

    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
Nucleotide Protein
Heading Accession and Version

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